Protein databases

From Wiki CEINGE

Revision as of 19:21, 25 June 2007 by Giovanni (Talk | contribs)
(diff) ←Older revision | Current revision (diff) | Newer revision→ (diff)
Jump to: navigation, search
  • REFSEQP: Database of protein information from NCBI
  • UNIPROT: The UniProt Knowledgebase is the central database of protein sequences with accurate, consistent, *REMTREMBL: REM-TrEMBL (REMaining TrEMBL) contains translations of EMBL nucleotide sequences that will not be included in TrEMBL
  • UNIREF100: Non redundant sequence database which combines identical sequences and sub-fragments from the same organism into a single UniRef entry
  • UNIREF90: A non-redundant sequence set, based on uniref100 with each sequence representing a cluster of sequence with at least 90% sequence identity
  • UNIREF50: A non-redundant sequence set, based on uniref100 with each sequence representing a cluster of sequences with at least 50% sequence identity
  • FANTOMp: Database of translations of mouse transcriptome
  • IMGTHLA: The IMGT/HLA Database is part of the international ImMunoGeneTics IMGT project
  • IPI: International Protein Index - a top level guide to main proteome databases
  • REFSEQPNEW: Database of protein information from REFSEQ RefSeq Protein Updates
  • UNIPROT_SWISSPROT: The UniProt Knowledgebase is the central database of protein sequences with accurate, consistent, and rich sequence and functional annotation. UniProt/Swissprot contains manually-annotated records with information extracted from literature and curator-evaluated computational analysis
  • UNIPROT_TREMBL: The UniProt Knowledgebase is the central database of protein sequences with accurate, consistent, and rich sequence and functional annotation. UniProt/Trembl consists of computationally analyzed records that await full manual annotation
Personal tools