https://mediawiki.ceinge.unina.it/index.php?action=history&feed=atom&title=Structure 2026-08-14T01:17:22Z Revision history for this page on the wiki MediaWiki 1.10.0 https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=44&oldid=prev 2007-06-04T09:02:01Z

<p></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 09:02, 4 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 3:</strong></td> <td colspan="2" align="left"><strong>Line 3:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[Research lines]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[Research lines]] ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">*Identification of functional elements in <del style="color: red; font-weight: bold; text-decoration: none;">euchariotic </del>genomes through analysis of conserved sequence tags (CSTs)</td><td>+</td><td style="background: #cfc; font-size: smaller;">*Identification of functional elements in <ins style="color: red; font-weight: bold; text-decoration: none;">eukaryotic </ins>genomes through analysis of conserved sequence tags (CSTs)</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">*Analysis of populations of repeated bacterial RNA sequences, characterized by stable stem-loop structures.</td><td> </td><td style="background: #eee; font-size: smaller;">*Analysis of populations of repeated bacterial RNA sequences, characterized by stable stem-loop structures.</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">*Image processing applied to the study of cell movement.</td><td> </td><td style="background: #eee; font-size: smaller;">*Image processing applied to the study of cell movement.</td></tr> <tr><td colspan="2" align="left"><strong>Line 15:</strong></td> <td colspan="2" align="left"><strong>Line 15:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">*[[IT Services#I server<del style="color: red; font-weight: bold; text-decoration: none;">:</del>Servers]]</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#I server<ins style="color: red; font-weight: bold; text-decoration: none;">|</ins>Servers]]</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">*[[IT Services#La rete<del style="color: red; font-weight: bold; text-decoration: none;">:</del>Network]]</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#La rete<ins style="color: red; font-weight: bold; text-decoration: none;">|</ins>Network]]</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">*[[IT Services#Servizi<del style="color: red; font-weight: bold; text-decoration: none;">:</del>Basic services]]</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#Servizi<ins style="color: red; font-weight: bold; text-decoration: none;">|</ins>Basic services]]</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">*[[IT Services#Servizi<del style="color: red; font-weight: bold; text-decoration: none;">:</del>Basic services]]</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#Servizi<ins style="color: red; font-weight: bold; text-decoration: none;">|</ins>Basic services]]</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td></tr> </table>

Giovanni https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=37&oldid=prev 2007-06-03T17:43:07Z

<p></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 17:43, 3 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 15:</strong></td> <td colspan="2" align="left"><strong>Line 15:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#I server:Servers]]</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#La rete:Network]]</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#Servizi:Basic services]]</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[IT Services#Servizi:Basic services]]</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td></tr> </table>

82.49.95.75 https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=27&oldid=prev 2007-06-01T17:17:07Z

<p><span class="autocomment"><a href="/index.php/Bioinfo_Services" title="Bioinfo Services">Bioinfo Services</a></span></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 17:17, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 10:</strong></td> <td colspan="2" align="left"><strong>Line 10:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">*[[EMBOSS]]</td><td> </td><td style="background: #eee; font-size: smaller;">*[[EMBOSS]]</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">*[[SRS databases]]</td><td> </td><td style="background: #eee; font-size: smaller;">*[[SRS databases]]</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[ENSEMBL]]</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[CEINGE facilities]]</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[Research DB]]</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td></tr> </table>

Leandra https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=25&oldid=prev 2007-06-01T17:12:13Z

<p><span class="autocomment"><a href="/index.php/Bioinfo_Services" title="Bioinfo Services">Bioinfo Services</a></span></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 17:12, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 9:</strong></td> <td colspan="2" align="left"><strong>Line 9:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[Bioinfo Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[Bioinfo Services]] ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">*[[EMBOSS]]</td><td> </td><td style="background: #eee; font-size: smaller;">*[[EMBOSS]]</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[SRS databases]]</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td></tr> </table>

Leandra https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=23&oldid=prev 2007-06-01T17:06:37Z

<p></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 17:06, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 8:</strong></td> <td colspan="2" align="left"><strong>Line 8:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[Bioinfo Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[Bioinfo Services]] ==</td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">*[[EMBOSS]]</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">==[[The bioinformatics group#References |References]] ==</td></tr> </table>

Leandra https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=16&oldid=prev 2007-06-01T15:53:39Z

<p><span class="autocomment"><a href="/index.php/The_bioinformatics_group" title="The bioinformatics group">References</a></span></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 15:53, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 11:</strong></td> <td colspan="2" align="left"><strong>Line 11:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">==[[The bioinformatics group |References]] ==</td><td>+</td><td style="background: #cfc; font-size: smaller;">==[[The bioinformatics group<ins style="color: red; font-weight: bold; text-decoration: none;">#References </ins>|References]] ==</td></tr> </table>

Leandra https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=15&oldid=prev 2007-06-01T15:51:52Z

<p><span class="autocomment">References</span></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 15:51, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 11:</strong></td> <td colspan="2" align="left"><strong>Line 11:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[IT Services]] ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">== References ==</td><td>+</td><td style="background: #cfc; font-size: smaller;">==<ins style="color: red; font-weight: bold; text-decoration: none;">[[The bioinformatics group |</ins>References<ins style="color: red; font-weight: bold; text-decoration: none;">]] </ins>==</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">&#160;</td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;"><del style="color: red; font-weight: bold; text-decoration: none;">PETRILLO M., SILVESTRO G., DI NOCERA P., BOCCIA A. and PAOLELLA G. Stem-loop structures in prokaryotic genomes (2006) BMC GENOMICS 2006, 7:170</del></td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">&#160;</td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;"><del style="color: red; font-weight: bold; text-decoration: none;">BARONE MV, GIMIGLIANO A, CASTORIA G, PAOLELLA G, MAURANO F, PAPARO F, MARIA M, NANAYAKKARA M, MINEO A, MIELE E, TRONCONE R, AURICCHIO S. (2006) Growth factor-like activity of gliadin, an alimentary protein: implications for celiac disease (CD). Gut. 2006 Aug 4; </del></td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">&#160;</td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;"><del style="color: red; font-weight: bold; text-decoration: none;">MILANESI L., PETRILLO M., SEPE L., BOCCIA A., D'AGOSTINO N., PASSAMANO M., DINARDO S., CASADIO R. and PAOLELLA G. (2005). Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity. BMC BIOINFORMATICS. 6(Suppl 4):S20 ISSN: 1471-2105. </del></td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">&#160;</td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;"><del style="color: red; font-weight: bold; text-decoration: none;">BOCCIA A., PETRILLO M, DI BERNARDO D., GUFFANTI A., MIGNONE F., CONFALONIERI S., LUZI L, PESOLE G., PAOLELLA G., BALLABIO A., BANFI S. (2005). DG-CST (Disease Gene Conserved Sequence Tags), a database of human-mouse conserved elements associated to disease genes. NUCLEIC ACIDS RESEARCH. vol. 33 pp. D505-D510 ISSN: 0305-1048 </del></td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">&#160;</td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;"><del style="color: red; font-weight: bold; text-decoration: none;">PAOLELLA G., MARTINI G (2003). Bioinformatica. In TRECCANI Enciclopedia del Novecento ROMA: Istituto Enciclopedia Italiana (ITALY).</del></td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> </table>

Leandra https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=14&oldid=prev 2007-06-01T15:45:06Z

<p><span class="autocomment"><a href="/index.php/The_bioinformatics_group" title="The bioinformatics group">The bioinformatics group</a></span></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 15:45, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 1:</strong></td> <td colspan="2" align="left"><strong>Line 1:</strong></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[The bioinformatics group]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[The bioinformatics group]] ==</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">The group is mainly involved in genome analysis, aiming to identify novel functional elements through a comparative approach. Work in this area led to the generation of two databases containing a large number of conserved sequence elements (CSTs) identified within the human genome and their counterparts identified in the genome of other vertebrates, ranging from mouse to fish. Occasionally such elements are also found in more distant organisms such as insects and other invertebrates. CSTs have been searched in the genomic regions including and surrounding genes involved in genetically transmitted diseases (DG-CST) and genes coding for the full complement of human protein kinases (KinWeb). The two databases are being maintained and are made available online to the scientific community (http://dgcst.ceinge.unina.it, http://kinweb.ceinge.unina.it).</td><td colspan="2">&nbsp;</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">An important goal of genome analysis is the identification of elements corresponding to non coding RNAs. Within this scope, 50 bacterial genomes have been used as a model system, and analyzed in search of families of repeated sequence elements characterized by the presence of stable stem-loop secondary RNA structures. This approach led to the identification of all previously described families and of several novel ones, which have been collected within an annotated database, currently in the process of being made available to the public.</td><td colspan="2">&nbsp;</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">Finally, a specific interest in image analysis and its application to the study of cell movement led to the production of a number of tools aimed to store and process multidimensional images, generated in video time-lapse microscopy experiments, in order to extract statistics about motion features of fibroblasts and other cell lines. The role of oncogenes such as Ras and Src in cell motility has been evaluated, by using single cell transformed fibroblast cell lines.</td><td colspan="2">&nbsp;</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;"></td><td> </td><td style="background: #eee; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">== [[Research lines]] ==</td><td> </td><td style="background: #eee; font-size: smaller;">== [[Research lines]] ==</td></tr> </table>

Leandra https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=12&oldid=prev 2007-06-01T15:39:26Z

<p></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 15:39, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 1:</strong></td> <td colspan="2" align="left"><strong>Line 1:</strong></td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">&#160;</td><td>+</td><td style="background: #cfc; font-size: smaller;">== <ins style="color: red; font-weight: bold; text-decoration: none;">[[</ins>The bioinformatics group<ins style="color: red; font-weight: bold; text-decoration: none;">]] </ins>==</td></tr> <tr><td>-</td><td style="background: #ffa; font-size: smaller;">== The bioinformatics group ==</td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">The group is mainly involved in genome analysis, aiming to identify novel functional elements through a comparative approach. Work in this area led to the generation of two databases containing a large number of conserved sequence elements (CSTs) identified within the human genome and their counterparts identified in the genome of other vertebrates, ranging from mouse to fish. Occasionally such elements are also found in more distant organisms such as insects and other invertebrates. CSTs have been searched in the genomic regions including and surrounding genes involved in genetically transmitted diseases (DG-CST) and genes coding for the full complement of human protein kinases (KinWeb). The two databases are being maintained and are made available online to the scientific community (http://dgcst.ceinge.unina.it, http://kinweb.ceinge.unina.it).</td><td> </td><td style="background: #eee; font-size: smaller;">The group is mainly involved in genome analysis, aiming to identify novel functional elements through a comparative approach. Work in this area led to the generation of two databases containing a large number of conserved sequence elements (CSTs) identified within the human genome and their counterparts identified in the genome of other vertebrates, ranging from mouse to fish. Occasionally such elements are also found in more distant organisms such as insects and other invertebrates. CSTs have been searched in the genomic regions including and surrounding genes involved in genetically transmitted diseases (DG-CST) and genes coding for the full complement of human protein kinases (KinWeb). The two databases are being maintained and are made available online to the scientific community (http://dgcst.ceinge.unina.it, http://kinweb.ceinge.unina.it).</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">An important goal of genome analysis is the identification of elements corresponding to non coding RNAs. Within this scope, 50 bacterial genomes have been used as a model system, and analyzed in search of families of repeated sequence elements characterized by the presence of stable stem-loop secondary RNA structures. This approach led to the identification of all previously described families and of several novel ones, which have been collected within an annotated database, currently in the process of being made available to the public.</td><td> </td><td style="background: #eee; font-size: smaller;">An important goal of genome analysis is the identification of elements corresponding to non coding RNAs. Within this scope, 50 bacterial genomes have been used as a model system, and analyzed in search of families of repeated sequence elements characterized by the presence of stable stem-loop secondary RNA structures. This approach led to the identification of all previously described families and of several novel ones, which have been collected within an annotated database, currently in the process of being made available to the public.</td></tr> </table>

143.225.151.39 https://mediawiki.ceinge.unina.it/index.php?title=Structure&diff=11&oldid=prev 2007-06-01T15:38:03Z

<p></p> <table border='0' width='98%' cellpadding='0' cellspacing='4' style="background-color: white;"> <tr> <td colspan='2' width='50%' align='center' style="background-color: white;">←Older revision</td> <td colspan='2' width='50%' align='center' style="background-color: white;">Revision as of 15:38, 1 June 2007</td> </tr> <tr><td colspan="2" align="left"><strong>Line 1:</strong></td> <td colspan="2" align="left"><strong>Line 1:</strong></td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;"></td></tr> <tr><td colspan="2">&nbsp;</td><td>+</td><td style="background: #cfc; font-size: smaller;">== The bioinformatics group ==</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">The group is mainly involved in genome analysis, aiming to identify novel functional elements through a comparative approach. Work in this area led to the generation of two databases containing a large number of conserved sequence elements (CSTs) identified within the human genome and their counterparts identified in the genome of other vertebrates, ranging from mouse to fish. Occasionally such elements are also found in more distant organisms such as insects and other invertebrates. CSTs have been searched in the genomic regions including and surrounding genes involved in genetically transmitted diseases (DG-CST) and genes coding for the full complement of human protein kinases (KinWeb). The two databases are being maintained and are made available online to the scientific community (http://dgcst.ceinge.unina.it, http://kinweb.ceinge.unina.it).</td><td> </td><td style="background: #eee; font-size: smaller;">The group is mainly involved in genome analysis, aiming to identify novel functional elements through a comparative approach. Work in this area led to the generation of two databases containing a large number of conserved sequence elements (CSTs) identified within the human genome and their counterparts identified in the genome of other vertebrates, ranging from mouse to fish. Occasionally such elements are also found in more distant organisms such as insects and other invertebrates. CSTs have been searched in the genomic regions including and surrounding genes involved in genetically transmitted diseases (DG-CST) and genes coding for the full complement of human protein kinases (KinWeb). The two databases are being maintained and are made available online to the scientific community (http://dgcst.ceinge.unina.it, http://kinweb.ceinge.unina.it).</td></tr> <tr><td> </td><td style="background: #eee; font-size: smaller;">An important goal of genome analysis is the identification of elements corresponding to non coding RNAs. Within this scope, 50 bacterial genomes have been used as a model system, and analyzed in search of families of repeated sequence elements characterized by the presence of stable stem-loop secondary RNA structures. This approach led to the identification of all previously described families and of several novel ones, which have been collected within an annotated database, currently in the process of being made available to the public.</td><td> </td><td style="background: #eee; font-size: smaller;">An important goal of genome analysis is the identification of elements corresponding to non coding RNAs. Within this scope, 50 bacterial genomes have been used as a model system, and analyzed in search of families of repeated sequence elements characterized by the presence of stable stem-loop secondary RNA structures. This approach led to the identification of all previously described families and of several novel ones, which have been collected within an annotated database, currently in the process of being made available to the public.</td></tr> </table>

143.225.151.39