CAPRI

From Wiki CEINGE

CAPRI (Common Application Program Remote Interface) is a web interface for accessing all the major tools currently installed at CEINGE. It was developed in our lab and can be used only by registered users.

It resembles a typical desktop application where the user selects the sequences and uses a number of menus to access the various functions but in reality this tools allow to have full access to the processing power and the databases available on the CEINGE's remote servers.

Contents 1 Manual 1.1 DNA Page 1.2 Protein Page 1.3 Alignment Page 1.4 HMM Page 1.5 TREE Page

Manual

CAPRI consists of:

• a worksheet (1), in which the user can insert and edit his data. The easiest way is to paste here your sequences.
• a lateral menu bar (2), which allow to: open other worksheets, load data from disk, servers or databases, copy the visible data to a new page and to select which sequences have to be displayed.
• a top menu bar (3), which allow to access to the installed analysis tool and which dynamically changes depending on the number of sequences.

DNA Page

In this worksheet user can analyze nucleic acid sequences like DNA or RNA.

Protein Page

Alignment Page

HMM Page

TREE Page