Capri DNA page

From Wiki CEINGE

Revision as of 18:17, 19 June 2007 (edit) Luca (Talk | contribs) (New page: DNA page is the CAPRI default page that allows to analyze nucleic acid sequences like DNA or RNA. Top menu bar changes if one, two or more sequences are inserted and analyzed at the same t...) ← Previous diff		Revision as of 18:18, 19 June 2007 (edit) (undo) Luca (Talk | contribs) Next diff →
Line 1:		Line 1:
-	DNA page is the CAPRI default page that allows to analyze nucleic acid sequences like DNA or RNA. Top menu bar changes if one, two or more sequences are inserted and analyzed at the same time, indicating which tools are available for the analysis. [[Capri_DNA_page|More...]]	+	DNA page is the CAPRI default page that allows to analyze nucleic acid sequences like DNA or RNA. Top menu bar changes if one, two or more sequences are inserted and analyzed at the same time, indicating which tools are available for the analysis.
	;More used functions in single sequence analysis divided for menu:		;More used functions in single sequence analysis divided for menu:

---

Revision as of 18:18, 19 June 2007

DNA page is the CAPRI default page that allows to analyze nucleic acid sequences like DNA or RNA. Top menu bar changes if one, two or more sequences are inserted and analyzed at the same time, indicating which tools are available for the analysis.

More used functions in single sequence analysis divided for menu

• Analyze: computing of GC content and temperature melting
• Process: making the complement and the translation in protein
• Search: finding restriction enzyme (RE) sites, patterns, open reading frames (ORFs), PCR primers and siRNAs
• Extract: extracting a sequence fragment with the given coordinates
• SearchDB: searching in sequence databases.

More used functions in multi sequence analysis 

• Draw: drawing a dot-plot, which shows sequence similarity between sequences
• Search: searching matches by profile
• Align: aligning sequences with the most popular tools (ClustalW, matcher, strecher).