biolocal:ExecutingOnCluster

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Each bioprogs binary is replaced by a link to /bioprogs/clr_computing/bin/ln2cmd: a command that allows executing remotely the corresponding command on a cluster node. Example:

grc_translate -> /bioprogs/clr_computing/bin/ln2cmd

Organization of /bioprogs/clr_computing/bin folder

getNode.php
ln2cmd
ln2cmd_nostdin
/include/
  clLaunchv2.php
  clLunch.php

To execute a command in batch by using the & character needs that the corresponding binary is replaced by /bioprogs/clr_computing/bin/ln2cmd_nostdin. Example:

grc_translate -> /bioprogs/clr_computing/bin/ln2cmd_nostdin
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