biolocal:BioinfoActivity
From Wiki CEINGE
| Revision as of 10:47, 21 April 2008 (edit) Gianluca (Talk | contribs) (→Network) ← Previous diff |
Current revision (13:41, 23 October 2009) (edit) (undo) Luca (Talk | contribs) (→Group services) |
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| + | == Chronological maintenance report == | ||
| + | [[biolocal:maintenanceReport|Maintenance report]] : Report of changes to network, server configuration and others. | ||
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| == Network == | == Network == | ||
| [[biolocal:ed4VpnFromCeinge|VPN connectivity to the Ed4 private network]] : The network schema showing the connectivity from the ceinge labs to the ed4 private network, through the vpn connection. | [[biolocal:ed4VpnFromCeinge|VPN connectivity to the Ed4 private network]] : The network schema showing the connectivity from the ceinge labs to the ed4 private network, through the vpn connection. | ||
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| [[biolocal:wirelessForGuests|Guest access to wireless network]] : Service to assign temporary access account for wireless network. | [[biolocal:wirelessForGuests|Guest access to wireless network]] : Service to assign temporary access account for wireless network. | ||
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| + | [[biolocal:DNS|Domain Name System]] : Distribution of DNS servers. | ||
| == Servers == | == Servers == | ||
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| [[biolocal:ClusterMounts|Cluster mount points]] : Volumes mounted on cluster's nodes | [[biolocal:ClusterMounts|Cluster mount points]] : Volumes mounted on cluster's nodes | ||
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| + | [[biolocal:nagios|Nagios monitoring system]] : Configuration description of the Nagios monitoring server | ||
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| + | == Clustering and grid == | ||
| + | [[biolocal:nodedisk|Cluster node disk]] : Partitioning and initialization of a cluster node disk | ||
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| + | [[biolocal:jobsub|Glite job submission]] : job submission on the grid based on glite | ||
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| + | [[biolocal:certdeleg|Certificate extension]] : how to extend a certificate duration by using delegtion | ||
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| + | [[biolocal:Robot on UI|Robot certificate on UI]] : Use of the robot certificate on the UI server | ||
| == Storage == | == Storage == | ||
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| [[biolocal:veil|Veil postgres plugin]] : Compile and install the Veil postgres plugin | [[biolocal:veil|Veil postgres plugin]] : Compile and install the Veil postgres plugin | ||
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| + | [[biolocal:linux raid|Linux RAID]] : Managing linux raid disks | ||
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| + | [[biolocal:diskless|Diskless management]] : Create and manage diskless OSes | ||
| + | *[[biolocal:HDdiskless|HD for diskless]] : Local HD partitioning for diskless OSes | ||
| == Software installations == | == Software installations == | ||
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| [[biolocal:gridUse|Access to the grid]] : A small guide to set the access to the grid using the personal certificates. | [[biolocal:gridUse|Access to the grid]] : A small guide to set the access to the grid using the personal certificates. | ||
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| + | [[biolocal:sharedPrograms|Bioinfo shared programs]] : Organization of bioinformatic shared programs. | ||
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| + | [[biolocal:executingOnCluster|Execution of bioinfo programs on cluster]]: Organization of files to launch a bioinfo programs on cluster | ||
| == Tips and Tricks == | == Tips and Tricks == | ||
| [[biolocal:shellFileEditing|Automate manipulation of text in file]] : Some bash commands to manipulate text in files in "non interctive" way. | [[biolocal:shellFileEditing|Automate manipulation of text in file]] : Some bash commands to manipulate text in files in "non interctive" way. | ||
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| + | == Research activity report == | ||
| + | [[biolocal:researchReport|Research activity report]] : Report of all research activities. | ||
Current revision
Contents |
[edit] Chronological maintenance report
Maintenance report : Report of changes to network, server configuration and others.
[edit] Network
VPN connectivity to the Ed4 private network : The network schema showing the connectivity from the ceinge labs to the ed4 private network, through the vpn connection. It allows the Diamante software to run on a private internal network distributed on different sites.
Guest access to wireless network : Service to assign temporary access account for wireless network.
Domain Name System : Distribution of DNS servers.
[edit] Servers
Biotmp file removing policy : Management of the files written in the biotmp cluster directory, exported by the pc-tera (143.225.151.53).
Recover the file server data : In case of corruption of the disks hosting the homes of the file server, a procedure of data recovering should be applied.
Cluster mount points : Volumes mounted on cluster's nodes
Nagios monitoring system : Configuration description of the Nagios monitoring server
[edit] Clustering and grid
Cluster node disk : Partitioning and initialization of a cluster node disk
Glite job submission : job submission on the grid based on glite
Certificate extension : how to extend a certificate duration by using delegtion
Robot certificate on UI : Use of the robot certificate on the UI server
[edit] Storage
Central storage networking : Architecture of the storage distribution on the FC and iSCSI network.
Central storage partitioning : Partitions on the central storage and their association to the accessing servers.
[edit] Howto
Configure the firewall for proftpd : The ftp server (proftpd) uses a port to establish a connection (port 21) and a number of ports to allow the transfer of the data; all that ports must be opened on the firewall.
Install and run the bigsister agent : A quick guide to the installation of the bigsister agent and its configuration for status notification to the bigsister server.
Write the script documentation : How to write and read the script documentation.
Wiki client usage : Make wiki code with a command line tool
Veil postgres plugin : Compile and install the Veil postgres plugin
Linux RAID : Managing linux raid disks
Diskless management : Create and manage diskless OSes
- HD for diskless : Local HD partitioning for diskless OSes
[edit] Software installations
Configure and compile httpd on cluster : Configure the httpd sources to make a customized installation on the cluster.
MailServer software installation : A short list of programs used to build a mail server.
Start a new project : How to start a new bioinformatical research project.
[edit] Group services
Bioinfo group server access : Bioinfo userid assignement and server access facilities.
Access to the grid : A small guide to set the access to the grid using the personal certificates.
Bioinfo shared programs : Organization of bioinformatic shared programs.
Execution of bioinfo programs on cluster: Organization of files to launch a bioinfo programs on cluster
[edit] Tips and Tricks
Automate manipulation of text in file : Some bash commands to manipulate text in files in "non interctive" way.
[edit] Research activity report
Research activity report : Report of all research activities.
